Greatest SS of all time

This topic got broached on the morning thread and, considering how we've entertained ourselves the last week or so, I thought this would be a good fanpost for the waning days of the offseason.  I'm not the statistical guru that philkid and some others are, so I'll open the dance and then let you guys weigh in with statistical arguments for and against the candidates.

A website called "The Baseball Page" has a list of the top 50 SS of all time: http://www.thebaseballpage.com/positions/rankings/SS.php.  

I know nothing about their methodology, but it seems like a good enough starting point.  The top 10 goes like this: 1) Alex Rodriguez, 2) Honus Wagner, 3) Barry Larkin, 4) Lou Boudreau, 5) Robin Yount, 6) Luke Appling, 7) Arky Vaughan, 8) Derek Jeter, 9) Joe Cronin, 10) Cal Ripken Jr.

I think the debate for #1 clearly lies between A-Rod and Honus.  A-Rod is viewed as the greatest power-hitting SS of all time, but interestingly Honus slightly edges him in OPS+.  A-Rod is tied for 39th all time at 147 (with Lance Berkman, Edgar Martinez, Willie McCovey, Mike Schmidt, and Willie Stargell.  Wagner's career OPS is 150, good enough for a 31st place tie with Charley Jones and Nap Lajoie.

Setting aside the adjusted OPS and looking at unadjusted numbers, Wagner had a sick offensive career, at a defense-first position in a dead-ball era.  In a 21 year career spanning 1897-1917, Wagner's career slash line is .327/.391/.466 (for an .857 OPS).  He hit 101 homers in a homer-unfriendly era, but averaged 37 doubles per season and led the league in doubles six times.  He also averaged 15 triples (three-time league leader) and stole a whopping 722 bases.  He won the batting title 8 times, led the league in OBP 4 times, and led the league in slugging (again, at a defense-first position), 6 times.

Rodriguez, by comparison, has a .305/.390/.576 slash line (.965 OPS) with 583 homers and 297 stolen bases.  Rodriguez has only one batting title to his credit, four slugging titles, and no OBP titles.  His doubles compare surprisingly well with Wagner (33) but has led the league only once. He has, however, averaged only 2 triples per season. 

As for defense, I know this is a difficult issue.  Rodriguez is viewed as a "good" defensive shortstop.  I have seen Honus' defense referred to as similar to Ozzie Smith's, perhaps better.  Whether that's legitimate or apocryphal, who knows.

Rodriguez's numbers come in a much more offensive-friendly era, both in terms of the ball, the parks, and the quality of pitching (i.e. the watering down from expansion).  By that same token, though, Wagner played in a segregated league which undoubtedly lessened some of his competition.

With that, I turn it over for the debate.  I'll put Wagner 1st, Rodriguez 2nd, and then a far gap to whoever is 3rd.